The detailed information of tRNA gene sequence


Sequence ID>WENV170979196
Genome IDMTKZ01080053
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3785
End posion on genome 3862
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gatttcacat
tRNA gene sequence 
GGGACCGTGGGGTAGCTTGGACTAGCCTCTCACCTTGGGGTGGTGGAAACTCGGGTTCAA
ATCCCGACGGTCCCACCA
Downstream region at tRNA end position 
ttggaaatag
Secondary structure (Cloverleaf model)
>WENV170979196	Pro	GGG
                   t      ACCA ttggaaatag
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     A G C C C     A
    T C G A        G      | | | | |     A
  T         T G G G       T C G G G     C
  G         + | | +                 T T
  G         G C C T
    A C T A        C     AAAC
                    T + G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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