The detailed information of tRNA gene sequence


Sequence ID>WENV170979197
Genome IDMTKZ01080280
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 336
End posion on genome 412
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaaatatttc
tRNA gene sequence 
GGGCTCGTAGCTCAGTTGGTTAGAGCGTTGCATTCACATTGCAAAGGTCTCAGGTTCGAA
TCCTGACGGGCCCACCA
Downstream region at tRNA end position 
agtaattaac
Secondary structure (Cloverleaf model)
>WENV170979197	Val	CAC
                   c      ACCA agtaattaac
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     A G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       T C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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