The detailed information of tRNA gene sequence


Sequence ID>WENV170979199
Genome IDMTKZ01080454
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1559
End posion on genome 1652
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcggcacgc
tRNA gene sequence 
GGAGAGGTGTCCGAGCTGGCCTAAGGAGCGCGACTGGAAATCGCGTAGGCGGGGGTAACC
TGTCTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gcttcatcgc
Secondary structure (Cloverleaf model)
>WENV170979199	Ser	GGA
                   c      GCCA gcttcatcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G C C T       G T G G G     C
  G           | | |                 T T
  C         A G G A
    C T A          G     TAGGCGGGGGTAACCTGTCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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