The detailed information of tRNA gene sequence


Sequence ID>WENV170979200
Genome IDMTKZ01080618
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2092
End posion on genome 2016
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tggcttgcag
tRNA gene sequence 
GCCCCCATAGTCTAGTGGCCTAGGACGCCTCCCTTTCAAGGAGGAGAGCAGGGGTTCGAA
TCCCCTTGGGGGTACCT
Downstream region at tRNA end position 
cggacgatga
Secondary structure (Cloverleaf model)
>WENV170979200	Glu	TTC
                   g      ACCT cggacgatga
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     AGAGC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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