The detailed information of tRNA gene sequence


Sequence ID>WENV170979203
Genome IDMTKZ01080771
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8944
End posion on genome 9018
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcaggaacac
tRNA gene sequence 
CGGGGTGTGGCACAGCTTGGCTAGAGCGCCTGGTTTGGGACCAGGAGGTCGCAGGTTCGA
ATCCTGTCACCCCGAtgc
Downstream region at tRNA end position 
tttgtatata
Secondary structure (Cloverleaf model)
>WENV170979203	Pro	TGG
                   c      Atgc tttgtatata
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
    T C G A        G      + | | | |     G
  T         C A C G       G C A G G     C
  G         |   | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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