The detailed information of tRNA gene sequence


Sequence ID>WENV170979214
Genome IDMTKZ01080847
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 163
End posion on genome 253
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctgcaagac
tRNA gene sequence 
GGAGAGGTGCCAGAGCGGTTGAATGGGGCGGTCTCGAAAACCGTTGTGGGGCTTGTCCCC
ACCGTGGGTTCGAATCCCACCCTCTCCGCCT
Downstream region at tRNA end position 
tttttattgt
Secondary structure (Cloverleaf model)
>WENV170979214	Ser	CGA
                   c      GCCT tttttattgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TGTGGGGCTTGTCCCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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