The detailed information of tRNA gene sequence


Sequence ID>WENV170979218
Genome IDMTKZ01080938
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2200
End posion on genome 2127
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgcataaac
tRNA gene sequence 
AGGTCTTTAGCTCAATTGGTAGAGTAGTGGTCTCCAAAACCATTGGTTGCAGGTTCAAGT
CCTGCAAGGCCTGCat
Downstream region at tRNA end position 
tacaggataa
Secondary structure (Cloverleaf model)
>WENV170979218	Trp	CCA
                   c      GCat tacaggataa
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     T - A
                     T - A          T G
                    T     C G T C C     A
      T A A        A      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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