The detailed information of tRNA gene sequence


Sequence ID>WENV170979223
Genome IDMTKZ01081189
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 701
End posion on genome 790
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctccgcgaac
tRNA gene sequence 
GGAAGGGTGGCCGAGTGGTTTAAGGCGCACGCCTGGAACGCGTGTTTACGTGAAAGCGTA
ACGAGGGTTCGAATCCCTCCTCTTCCGCCA
Downstream region at tRNA end position 
taattctttg
Secondary structure (Cloverleaf model)
>WENV170979223	Ser	GGA
                   c      GCCA taattctttg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TTTACGTGAAAGCGTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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