The detailed information of tRNA gene sequence


Sequence ID>WENV170979227
Genome IDMTKZ01081260
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1377
End posion on genome 1301
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tggcacagga
tRNA gene sequence 
GGCGAGATAGCTCAGATGGTTAGAGCGCATGATTCATAATCATGAGGTCCCGGGTTCAAT
TCCCGGTCTCGCTACAA
Downstream region at tRNA end position 
caaatagcct
Secondary structure (Cloverleaf model)
>WENV170979227	Met	CAT
                   a      ACAA caaatagcct
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T T
                    T     G G C C C     A
      A G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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