The detailed information of tRNA gene sequence


Sequence ID>WENV170979233
Genome IDMTKZ01081465
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2214
End posion on genome 2299
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ttatatggtT
tRNA gene sequence 
GCGGGGTTCGCCAAGCTGGCCAAAGGCGCAGGACTTAAGATCCTGTCTCGCAGGAGTTCG
CGGGTTCGAATCCCGTACCCCGCATta
Downstream region at tRNA end position 
aacctttttc
Secondary structure (Cloverleaf model)
>WENV170979233	Leu	TAA
                   T      ATta aacctttttc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T G C C C     A
    T C G A        C      + | | | |     G
  G         A C C G       G C G G G     C
  G           | | |                 T T
  C         A G G C
    C A A          G     TCTCGCAGGAGTTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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