The detailed information of tRNA gene sequence


Sequence ID>WENV170979235
Genome IDMTKZ01081663
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 124
End posion on genome 197
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aaaagaaaag
tRNA gene sequence 
CGGGGTGTAGTTCAGATGGCTAGAACGCTACGTTCGGGACGTAGAGGTCGCTCGTTCAAG
TCGAGTCACCCCGAtat
Downstream region at tRNA end position 
atcttacttc
Secondary structure (Cloverleaf model)
>WENV170979235	Pro	CGG
                   g      Atat atcttacttc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G A G C     A
      A G A        A      + | | | |     A
    T       C T T G       G C T C G     C
    G       | | | |                 T T
    G       G A A C
      C T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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