The detailed information of tRNA gene sequence


Sequence ID>WENV170979239
Genome IDMTKZ01082025
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3610
End posion on genome 3535
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaccgcaaat
tRNA gene sequence 
AGGGGTATGGTGTAATTGGTAACATAACGGTCTCCAAAACCGCTGACTCCGGGTTCGAGT
CCTGGTGCCCCTGCAA
Downstream region at tRNA end position 
tgcttgacat
Secondary structure (Cloverleaf model)
>WENV170979239	Trp	CCA
                   t      GCAA tgcttgacat
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     G G T C C     A
      T A A        G      | | + | |     G
    T       T G T G       C C G G G     C
    G       | | | +                 T T
    G       A C A T
      T A          A     TGACT
                    A   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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