The detailed information of tRNA gene sequence


Sequence ID>WENV170979243
Genome IDMTKZ01082025
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1454
End posion on genome 1369
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgctactaat
tRNA gene sequence 
ACCGTCTTGCCAGAGTGGCCAATCGGGGAGGTTTCATAAGCCTCTGCTTTTAAGCTTCGT
GAGTTCGAATCTCACAGTCGGTACAA
Downstream region at tRNA end position 
ataaaatatt
Secondary structure (Cloverleaf model)
>WENV170979243	Met	CAT
                   t      ACAA ataaaatatt
                     A - T
                     C - G
                     C - G
                     G - C
                     T   T
                     C - G
                     T - A          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G A G     C
    G       +   | |                 T T
    C       T C G G
      C A A        G     TGCTTTTAAGCTTC
                    G - C
                    A - T
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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