The detailed information of tRNA gene sequence


Sequence ID>WENV170979258
Genome IDMTKZ01082853
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 362
End posion on genome 286
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcccgctcaa
tRNA gene sequence 
GGCCCCGTAGCGCAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG
TCCCGTCGGGGTCGCCG
Downstream region at tRNA end position 
gctcctcacg
Secondary structure (Cloverleaf model)
>WENV170979258	Asp	GTC
                   a      GCCG gctcctcacg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C G C G       G C G G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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