The detailed information of tRNA gene sequence


Sequence ID>WENV170979272
Genome IDMTKZ01083277
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1739
End posion on genome 1652
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cgcaccccgt
tRNA gene sequence 
GCCGGAGTGGTGAAACTGGTAGACGCAGGGGACTCAAAATCCCCCGCTCCTCGCGAGCAT
GTCGGTTCGACTCCGACCTCCGGCACCA
Downstream region at tRNA end position 
atcttcattt
Secondary structure (Cloverleaf model)
>WENV170979272	Leu	CAA
                   t      ACCA atcttcattt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T C
                    T     C A G C C     A
      C A A        G      | | | | |     G
    T       A G T G       G T C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        A     CGCTCCTCGCGAGCAT
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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