The detailed information of tRNA gene sequence


Sequence ID>WENV170979277
Genome IDMTKZ01083605
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 47
End posion on genome 122
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccagccatct
tRNA gene sequence 
GCCTCCGTGGTCTAGCGGCCTAGGACACCGCCCTCTCAAGGCGGCAACACGGGTTCGAAT
CCCGTCGGGGGTGCCA
Downstream region at tRNA end position 
gcaggagaac
Secondary structure (Cloverleaf model)
>WENV170979277	Glu	CTC
                   t      GCCA gcaggagaac
                     G + T
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        G      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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