The detailed information of tRNA gene sequence


Sequence ID>WENV170979280
Genome IDMTKZ01083754
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1950
End posion on genome 1874
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cggtttattt
tRNA gene sequence 
GGAGGCATAGCTCAGCTGGTTAGAGCGCGCGCTTCACATGCGCGAGGTCATGGGTTCGAG
CCCCTTTGCCTCTACCA
Downstream region at tRNA end position 
aattgaatga
Secondary structure (Cloverleaf model)
>WENV170979280	Val	CAC
                   t      ACCA aattgaatga
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          C G
                    T     T T C C C     A
      C G A        A      |   | | |     G
    T       C T C G       A T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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