The detailed information of tRNA gene sequence


Sequence ID>WENV170979291
Genome IDMTKZ01084004
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 712
End posion on genome 787
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcattttT
tRNA gene sequence 
GGCGGTGTAGCTCAGATGGCTAGAGCGTCCGGTTCATACCCGGGAGGTCATGGGTTCGAC
CCCCTTCGCCGCTATaa
Downstream region at tRNA end position 
tgccttgctt
Secondary structure (Cloverleaf model)
>WENV170979291	Met	CAT
                   T      ATaa tgccttgctt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          C C
                    T     T T C C C     A
      A G A        A      |   | | |     G
    T       C T C G       A T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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