The detailed information of tRNA gene sequence


Sequence ID>WENV170979293
Genome IDMTKZ01084004
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 897
End posion on genome 986
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atcagcttat
tRNA gene sequence 
GGAGGATTACCCAAGTCCGGCTGAAGGGAACGGTCTTGAAAACCGTCAGGCGTGTAAAAG
CGCGCAAGGGTTCGAATCCCTTATCCTCCTtta
Downstream region at tRNA end position 
gtggccttag
Secondary structure (Cloverleaf model)
>WENV170979293	Ser	TGA
                   t      Ttta gtggccttag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T T C C C     A
    C T G A        A      | | | | |     G
  C         A C C C       A A G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGCGTGTAAAAGCGCGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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