The detailed information of tRNA gene sequence


Sequence ID>WENV170979298
Genome IDMTKZ01084004
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1469
End posion on genome 1556
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctctttttta
tRNA gene sequence 
GGGGAAGTACTCAAGTGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGTTAACGCGG
CGCGAGGGTTCAAATCCCTCCTTCTCCGtag
Downstream region at tRNA end position 
ctttatcaga
Secondary structure (Cloverleaf model)
>WENV170979298	Ser	GCT
                   a      Gtag ctttatcaga
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGTTAACGCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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