The detailed information of tRNA gene sequence


Sequence ID>WENV170979301
Genome IDMTKZ01084004
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1807
End posion on genome 1881
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aacctccatT
tRNA gene sequence 
GGTTCCGTGGTGTAGGGGTCAACATGCCTGCCTGTCACGCAGGAGATCGCGGGTTCAAAT
CCCGTCGGAGCCGTtt
Downstream region at tRNA end position 
ttactttctg
Secondary structure (Cloverleaf model)
>WENV170979301	Asp	GTC
                   T      GTtt ttactttctg
                     G - C
                     G - C
                     T + G
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
      G G A        G      + | | | |     A
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      C A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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