The detailed information of tRNA gene sequence


Sequence ID>WENV170979304
Genome IDMTKZ01084004
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2245
End posion on genome 2318
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcctctgaaT
tRNA gene sequence 
AGGGGTATAGTTTAAAGGTAGAACAACGGTCTCCAAAACCGTCGGTGTGGGTTCAATTCC
TACTACCCCTGTCt
Downstream region at tRNA end position 
caacattata
Secondary structure (Cloverleaf model)
>WENV170979304	Trp	CCA
                   T      GTCt caacattata
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T T
                    T     C A T C C     A
        A A        A      | | + | |     A
      A     T T T G       G T G G G     C
      G     + | | |                 T T
      G     G A A C
        T A        A     CGGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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