The detailed information of tRNA gene sequence


Sequence ID>WENV170979307
Genome IDMTKZ01084004
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2510
End posion on genome 2580
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcaacatctc
tRNA gene sequence 
GGCGGTATAGCCAAGTGGTAAGGCACAGGTCTGCAAAACCTCTATCACCGGTTCAAATCC
GGTTACCGCCTttc
Downstream region at tRNA end position 
cataacaaca
Secondary structure (Cloverleaf model)
>WENV170979307	Cys	GCA
                   c      Tttc cataacaaca
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     T G G C C     A
        G A        A      | | | | |     A
      T     A C C G       A C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    C   C
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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