The detailed information of tRNA gene sequence


Sequence ID>WENV170979309
Genome IDMTKZ01084092
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1613
End posion on genome 1688
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
attccgcgaa
tRNA gene sequence 
CGGGGTGTGGCGCAGTTGGCAGCGCGCGGCGTTTGGGACGCTGAGGTCGGAGGTTCGAGT
CCTCTCACCCCGACCG
Downstream region at tRNA end position 
atcccacttc
Secondary structure (Cloverleaf model)
>WENV170979309	Pro	TGG
                   a      ACCG atcccacttc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C T C C     A
      T G A        G      + | | | |     G
    T       C G C G       G G A G G     C
    G       | | | |                 T T
    G       G C G C
      C A          G     AGGTC
                    C - G
                    G + T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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