The detailed information of tRNA gene sequence


Sequence ID>WENV170979311
Genome IDMTKZ01084134
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9818
End posion on genome 9905
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcgctttaa
tRNA gene sequence 
GGAAGGATCGCATAGTGGTCGAGTGCGCTCGCTTGGAAAGCGAGTAGGCTGTCACAGGCC
TCCGGGGTTCGAATCCCCGTCCTTCCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170979311	Ser	GGA
                   a      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     G C C C C     A
      T G A        C      | | | | |     G
    G       T A C G       C G G G G     C
    G       + | | |                 T T
    T       G T G C
      C G A        G     TAGGCTGTCACAGGCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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