The detailed information of tRNA gene sequence


Sequence ID>WENV170979316
Genome IDMTKZ01084349
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3169
End posion on genome 3085
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gcgtagtttt
tRNA gene sequence 
GGGCAGATACCCAAGTGGCCAAAGGGGGCTGACTGTAAATCAGCTGGCAGCGCCTTCGGA
GGTTCGAATCCTTCTCTGCCCACCT
Downstream region at tRNA end position 
tgtcagcagg
Secondary structure (Cloverleaf model)
>WENV170979316	Tyr	GTA
                   t      ACCT tgtcagcagg
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T          T A
                    T     C T T C C     A
      T G A        A      | + | | |     G
    G       A C C C       G G A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        G     TGGCAGCGCCTTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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