The detailed information of tRNA gene sequence


Sequence ID>WENV170979320
Genome IDMTKZ01084389
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2508
End posion on genome 2595
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcgcttcgc
tRNA gene sequence 
GGAGAGGTCGCATAGTCCGGTCTAGTGCGCGCGCCTGGAAAGCGCGTTGACTGAAAGGTC
TCGCAGGTTCAAATCCTGTCCTCTCCGCtt
Downstream region at tRNA end position 
tagagaataa
Secondary structure (Cloverleaf model)
>WENV170979320	Ser	GGA
                   c      GCtt tagagaataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
    C T G A        C      + | | | |     A
  C         T A C G       G C A G G     C
  G         + | | |                 T T
  G         G T G C
    T C T A        G     TTGACTGAAAGGTCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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