The detailed information of tRNA gene sequence


Sequence ID>WENV170979325
Genome IDMTKZ01084657
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 914
End posion on genome 837
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
catccgctct
tRNA gene sequence 
CGGGGAGTAGCGCAGCCCGGTTAGCGCGCAGCGTTCGGGACGCTGAGGTCGGAGGTTCAA
ATCCTCTCTCCCCGACCA
Downstream region at tRNA end position 
gcccgaaagg
Secondary structure (Cloverleaf model)
>WENV170979325	Pro	CGG
                   t      ACCA gcccgaaagg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     A
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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