The detailed information of tRNA gene sequence


Sequence ID>WENV170979328
Genome IDMTKZ01084805
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3128
End posion on genome 3053
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gttcacttgt
tRNA gene sequence 
GGCGAGATAGCTCAGCCGGTAGAGCAGAGGCCTGAAAAGCCTTGTGTCCCCAGTTCAATT
CTGGGTCTCGCCACCA
Downstream region at tRNA end position 
gtcgttttcg
Secondary structure (Cloverleaf model)
>WENV170979328	Phe	GAA
                   t      ACCA gtcgttttcg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T T
                    T     G G G T C     A
      C G A        A      | | | | |     A
    C       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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