The detailed information of tRNA gene sequence


Sequence ID>WENV170979330
Genome IDMTKZ01084884
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 546
End posion on genome 622
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cgacgttgat
tRNA gene sequence 
GCGCCTGTAGCTCAGTCGGACAGAGCAACGGCCTTCTAAGCCGTGGGTCAGGGGTTCGAA
TCCCTTCAGGCGCGCCA
Downstream region at tRNA end position 
actccgtggt
Secondary structure (Cloverleaf model)
>WENV170979330	Arg	TCT
                   t      GCCA actccgtggt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      A C A        A     GGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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