The detailed information of tRNA gene sequence


Sequence ID>WENV170979338
Genome IDMTKZ01085114
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1431
End posion on genome 1516
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agggccgacc
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTATGGCGCACGCTTGGAAAGCGTGTTGAGTGAAAGCTCTC
GGGGGTTCGAATCCCCCATCCTCCGCgg
Downstream region at tRNA end position 
ttgtgaccag
Secondary structure (Cloverleaf model)
>WENV170979338	Ser	GGA
                   c      GCgg ttgtgaccag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C C C C C     A
      T G A        C      | | | | |     G
    G       T C C G       G G G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGAGTGAAAGCTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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