The detailed information of tRNA gene sequence


Sequence ID>WENV170979349
Genome IDMTKZ01085854
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1239
End posion on genome 1335
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atccgtgcat
tRNA gene sequence 
GGGAGCAGATGGGTGCTGGTGTGCCCCTCGGTCTTCAAAACCGATGTAAGGGGTTAGAAG
CTTCTTGGGTGGGTTCGATTCCCACATGCTCTCGCCA
Downstream region at tRNA end position 
ggacaggggc
Secondary structure (Cloverleaf model)
>WENV170979349	SeC(p)	TCA
                   t      GCCA ggacaggggc
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C G        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + | | |                 T T
    T       G C C C
      G T          C     TGTAAGGGGTTAGAAGCTTCTTGG
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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