The detailed information of tRNA gene sequence


Sequence ID>WENV170979351
Genome IDMTKZ01085857
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2305
End posion on genome 2229
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gagcgagtat
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGCCACAGGTTCAAA
TCCTGTCCCCGCGACCA
Downstream region at tRNA end position 
gcttacggcg
Secondary structure (Cloverleaf model)
>WENV170979351	Met	CAT
                   t      ACCA gcttacggcg
                     T + G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       A C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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