The detailed information of tRNA gene sequence


Sequence ID>WENV170979361
Genome IDMTKZ01086516
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 932
End posion on genome 856
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cctgtgcact
tRNA gene sequence 
GGCCCTGTAGCTCAATTTGGCAGAGCAGTTGACTCTTAATCAATTGGTTAGAGGTTCGAG
TCCTCTCAGGGTCACCA
Downstream region at tRNA end position 
gcacacgaca
Secondary structure (Cloverleaf model)
>WENV170979361	Lys	CTT
                   t      ACCA gcacacgaca
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T C T C C     A
      T A A        A      | | | | |     G
    T       C T C G       A G A G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     TGGTT
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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