The detailed information of tRNA gene sequence


Sequence ID>WENV170979362
Genome IDMTKZ01086777
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 521
End posion on genome 598
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cccatacgtt
tRNA gene sequence 
GGGCGCGTAGCTCAGTTGGTTAGAGCGCACGGTTCACATCCGTGAGGTCCGTAGGTTCGA
GCCCTATCGCGCCCACAA
Downstream region at tRNA end position 
aatgagctgg
Secondary structure (Cloverleaf model)
>WENV170979362	Val	CAC
                   t      ACAA aatgagctgg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C G
                    T     T A T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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