The detailed information of tRNA gene sequence


Sequence ID>WENV170979367
Genome IDMTKZ01087042
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1382
End posion on genome 1472
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggacggaggc
tRNA gene sequence 
GGAGAGATGGCTGAGCGGCCTAAGGCACCCGACTCGAAATCGGGCGGGCGGTAAAAGCGT
CCCGTGGGTTCAAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tttttccagc
Secondary structure (Cloverleaf model)
>WENV170979367	Ser	CGA
                   c      GCCA tttttccagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G T C G       G T G G G     C
    G         + | |                 T T
    C       A G G C
      C T A        A     CGGGCGGTAAAAGCGTCCC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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