The detailed information of tRNA gene sequence


Sequence ID>WENV170979391
Genome IDMTKZ01088452
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1103
End posion on genome 1178
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttatcgattc
tRNA gene sequence 
GGGCCCTTAGCTTAGTTGGTAGAGCGCCGCGTTTGCAACGCGGAGGTCATCGGTTCAAAT
CCGATAGGGTCCACCA
Downstream region at tRNA end position 
cgtaaaaaat
Secondary structure (Cloverleaf model)
>WENV170979391	Ala	TGC
                   c      ACCA cgtaaaaaat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T A G C C     A
      T G A        A      | | | | |     A
    T       T T C G       A T C G G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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