The detailed information of tRNA gene sequence


Sequence ID>WENV170979392
Genome IDMTKZ01088547
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2529
End posion on genome 2621
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaccgtcctc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGATCGCCTGCTAAGCGATTACAGGGCTTATACCT
CTGTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
tgaacggctg
Secondary structure (Cloverleaf model)
>WENV170979392	Ser	GCT
                   c      GCCA tgaacggctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TACAGGGCTTATACCTCTGTC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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