The detailed information of tRNA gene sequence


Sequence ID>WENV170979396
Genome IDMTKZ01088547
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4112
End posion on genome 4204
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtgccaccgc
tRNA gene sequence 
GGAGAGGTGGCAGAGCTTGGTTGATTGCGCACGACTCGAAATCGTGTAGTGGTTCATACC
CACTCGGGGGTTCGAATCCCCCCGTCTCCGCCA
Downstream region at tRNA end position 
gaacgactgg
Secondary structure (Cloverleaf model)
>WENV170979396	Ser	CGA
                   c      GCCA gaacgactgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G   G
                     G - C          T A
                    T     C C C C C     A
    T C G A        G      | | | | |     G
  T         G A C G       G G G G G     C
  G         + | | |                 T T
  G         T T G C
    T T G A        G     TAGTGGTTCATACCCACTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK