The detailed information of tRNA gene sequence


Sequence ID>WENV170979401
Genome IDMTKZ01088629
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1402
End posion on genome 1478
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgctccgcgt
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTTAGAGCAGGGGAATCATAATCCCAAGGTCCGCGGTTCGAA
TCCGTGCGCCGCCACCA
Downstream region at tRNA end position 
ttctattctt
Secondary structure (Cloverleaf model)
>WENV170979401	Met	CAT
                   t      ACCA ttctattctt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G   A
                    G - C
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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