The detailed information of tRNA gene sequence


Sequence ID>WENV170979408
Genome IDMTKZ01088879
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4846
End posion on genome 4770
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gataactagc
tRNA gene sequence 
GGGCCCATGGTCTAGTTGGTCATGACGTCGCCTTTACACGGCGGAGGTCCTGAGTTCGAA
TCTCAGTGGGCCCACTA
Downstream region at tRNA end position 
atttttagat
Secondary structure (Cloverleaf model)
>WENV170979408	Val	TAC
                   c      ACTA atttttagat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G A C T C     A
      T G A        G      | | | | |     G
    T       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T C A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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