The detailed information of tRNA gene sequence


Sequence ID>WENV170979411
Genome IDMTKZ01089022
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 93
End posion on genome 16
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gccgtgttgt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCCGGTTAGCGCGCTTCGTTCGGGACGAAGAGGCCGGAGGTTCGA
ATCCTCTCACCCCGACCA
Downstream region at tRNA end position 
gtcaaaaaac
Secondary structure (Cloverleaf model)
>WENV170979411	Pro	CGG
                   t      ACCA gtcaaaaaac
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     G
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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