The detailed information of tRNA gene sequence


Sequence ID>WENV170979417
Genome IDMTKZ01089178
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 373
End posion on genome 462
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atttccgtgt
tRNA gene sequence 
GGAGGGGTCGCATAGCGGTCTAGTGCGGCGGTCTTGAAAACCGCTATTCTCGCAAGAGAA
TCGAGAGTTCGAATCTCTCCCCCTCCGCCA
Downstream region at tRNA end position 
ttttcaacgt
Secondary structure (Cloverleaf model)
>WENV170979417	Ser	TGA
                   t      GCCA ttttcaacgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C T C     A
      C G A        C      | | | | |     G
    G       T A C G       G A G A G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TATTCTCGCAAGAGAATC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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