The detailed information of tRNA gene sequence


Sequence ID>WENV170979424
Genome IDMTKZ01089361
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4223
End posion on genome 4146
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaatataatt
tRNA gene sequence 
GGCCGGTTCGTCTAGATGGCTCAGGACATCGCCCTTTCACGGCGGAGATCACGGGTTCGA
ATCCCGTACCGGCTACCA
Downstream region at tRNA end position 
tgcatgaatt
Secondary structure (Cloverleaf model)
>WENV170979424	Glu	TTC
                   t      ACCA tgcatgaatt
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T G C C C     A
    T A G A        C      | | | | |     G
  G         T C T G       A C G G G     C
  G         + | | |                 T T
  C         G G A C
    T C A          A     AGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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