The detailed information of tRNA gene sequence


Sequence ID>WENV170979426
Genome IDMTKZ01089390
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1591
End posion on genome 1682
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
gtgcaaaaat
tRNA gene sequence 
ATGCGTGTAGTGTAATGGTAGCACACAGGTCTCCGGGGTCTGATGCGTGGCGTCCAACCC
ACCGGTTCCGGTTCGATTCCGGGCACGCATGCtt
Downstream region at tRNA end position 
tgttgcggat
Secondary structure (Cloverleaf model)
>WENV170979426	Arg	CCG
                   t      GCtt tgttgcggat
                     A - T
                     T - A
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T T
                    T     G G G C C     A
        A A        A      + | | | |     G
      T     T G T G       T C C G G     C
      G     + | | |                 T T
      G     G C A C
        T A        A     ATGCGTGGCGTCCAACCCACCGGT
                    C - G
                    A - T
                    G - C
                    G + T
                    T + G
                  C       G
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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