The detailed information of tRNA gene sequence


Sequence ID>WENV170979427
Genome IDMTKZ01089390
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1689
End posion on genome 1783
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atgctttgtt
tRNA gene sequence 
GCGGATGTGGTGTAATGGCAGCACGCAGGCCTTCAGAGCCTGATTGGCGTACCTCCAGTA
CGCAGGTGCGGGTTCGATTCCCGTCGTCCGCTCTA
Downstream region at tRNA end position 
aaaaattcgt
Secondary structure (Cloverleaf model)
>WENV170979427	SeC	TCA
                   t      TCTA aaaaattcgt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T + G
                     G - C          T T
                    T     T G C C C     A
        A A        G      + | | | |     G
      T     T G T G       G C G G G     C
      G     + | | |                 T T
      G     G C A C
        C A        G     ATTGGCGTACCTCCAGTACGCAGGT
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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