The detailed information of tRNA gene sequence


Sequence ID>WENV170979429
Genome IDMTKZ01089742
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2256
End posion on genome 2181
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgacgcacta
tRNA gene sequence 
GGGGCATTAACTCAGTTGGTAGAGTGCGACCTTTGCAAGGTCGAAGTCAGGGGTTCGAGT
CCCCTATGCTCCACCG
Downstream region at tRNA end position 
tttgcgtcgc
Secondary structure (Cloverleaf model)
>WENV170979429	Ala	TGC
                   a      ACCG tttgcgtcgc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A          T G
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C A       A G G G G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     AAGTC
                    C - G
                    G - C
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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