The detailed information of tRNA gene sequence


Sequence ID>WENV170979437
Genome IDMTKZ01090022
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1337
End posion on genome 1410
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cggaccgccc
tRNA gene sequence 
GCTGCTGTAGCTCAGTTGGTAGAGTGCGTCCTTGGTAAGGACGAGGTCATGGGTTCGAAT
CCCATCAGCAGCTCtt
Downstream region at tRNA end position 
tgaggggcgt
Secondary structure (Cloverleaf model)
>WENV170979437	Thr	GGT
                   c      TCtt tgaggggcgt
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T A C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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