The detailed information of tRNA gene sequence


Sequence ID>WENV170979454
Genome IDMTKZ01090759
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 69
End posion on genome 159
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccctgcccgt
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGCCGATCGGGGCGGTCTCGAAAACCGTTGTGGGGCTCGTCCCC
ACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtcaagactt
Secondary structure (Cloverleaf model)
>WENV170979454	Ser	CGA
                   t      GCCA gtcaagactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    C       T C G G
      C G A        G     TGTGGGGCTCGTCCCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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