The detailed information of tRNA gene sequence


Sequence ID>WENV170979457
Genome IDMTKZ01091024
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 219
End posion on genome 130
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccttgtatat
tRNA gene sequence 
GGAGGGGTCGCATAGTGGCCTAGTGCGGCGGTCTTGAAAACCGCTATTCTCGTAAGAGAA
TCGAGAGTTCGAATCTCTCCCCCTCCGCCA
Downstream region at tRNA end position 
gtggaaaagc
Secondary structure (Cloverleaf model)
>WENV170979457	Ser	TGA
                   t      GCCA gtggaaaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        C      | | | | |     G
    G       T A C G       G A G A G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TATTCTCGTAAGAGAATC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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